SELECT 
  cscart_products_categories.product_id, 
  GROUP_CONCAT(
    IF(
      cscart_products_categories.link_type = "M", 
      CONCAT(
        cscart_products_categories.category_id, 
        "M"
      ), 
      cscart_products_categories.category_id
    )
  ) AS category_ids 
FROM 
  cscart_products_categories 
  INNER JOIN cscart_categories ON cscart_categories.category_id = cscart_products_categories.category_id 
  AND cscart_categories.storefront_id IN (0, 1) 
  AND (
    cscart_categories.usergroup_ids = '' 
    OR FIND_IN_SET(
      0, cscart_categories.usergroup_ids
    ) 
    OR FIND_IN_SET(
      1, cscart_categories.usergroup_ids
    )
  ) 
  AND cscart_categories.status IN ('A', 'H') 
WHERE 
  cscart_products_categories.product_id IN (
    1020, 1021, 638, 639, 980, 981, 982, 983, 
    984, 985, 986, 987, 988, 990, 991, 992, 
    993, 994, 995, 996, 997, 998, 999, 1000, 
    1001, 1002, 1003, 1004, 1005, 1006, 
    1007, 1008, 1009, 1010, 1011
  ) 
GROUP BY 
  cscart_products_categories.product_id

Query time 0.00112

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "108.96"
    },
    "grouping_operation": {
      "using_temporary_table": true,
      "using_filesort": true,
      "cost_info": {
        "sort_cost": "4.87"
      },
      "nested_loop": [
        {
          "table": {
            "table_name": "cscart_categories",
            "access_type": "ALL",
            "possible_keys": [
              "PRIMARY",
              "c_status",
              "p_category_id"
            ],
            "rows_examined_per_scan": 125,
            "rows_produced_per_join": 5,
            "filtered": "4.00",
            "cost_info": {
              "read_cost": "29.49",
              "eval_cost": "1.00",
              "prefix_cost": "30.49",
              "data_read_per_join": "20K"
            },
            "used_columns": [
              "category_id",
              "storefront_id",
              "usergroup_ids",
              "status"
            ],
            "attached_condition": "((`cscart`.`cscart_categories`.`storefront_id` in (0,1)) and ((`cscart`.`cscart_categories`.`usergroup_ids` = '') or find_in_set(0,`cscart`.`cscart_categories`.`usergroup_ids`) or find_in_set(1,`cscart`.`cscart_categories`.`usergroup_ids`)) and (`cscart`.`cscart_categories`.`status` in ('A','H')))"
          }
        },
        {
          "table": {
            "table_name": "cscart_products_categories",
            "access_type": "ref",
            "possible_keys": [
              "PRIMARY",
              "pt"
            ],
            "key": "PRIMARY",
            "used_key_parts": [
              "category_id"
            ],
            "key_length": "3",
            "ref": [
              "cscart.cscart_categories.category_id"
            ],
            "rows_examined_per_scan": 12,
            "rows_produced_per_join": 4,
            "filtered": "8.12",
            "index_condition": "(`cscart`.`cscart_products_categories`.`product_id` in (1020,1021,638,639,980,981,982,983,984,985,986,987,988,990,991,992,993,994,995,996,997,998,999,1000,1001,1002,1003,1004,1005,1006,1007,1008,1009,1010,1011))",
            "cost_info": {
              "read_cost": "61.60",
              "eval_cost": "0.97",
              "prefix_cost": "104.09",
              "data_read_per_join": "77"
            },
            "used_columns": [
              "product_id",
              "category_id",
              "link_type"
            ]
          }
        }
      ]
    }
  }
}

Result

product_id category_ids
638 365,363,309M
639 365,363,309M
980 364M,363,309
981 309,364M,363
982 309,364M,363
983 363,309,364M
984 364M,363,309
985 364M,363,309
986 364M,363,309
987 364M,363,309
988 309,364M,363
990 363,309,364M
991 364M,363,309
992 363,365M,309
993 363,365M,309
994 363,365M,309
995 365M,309,363
996 363,365M,309
997 363,365M,309
998 363,365M,309
999 363,365M,309
1000 363,365M,309
1001 309,363,365M
1002 365M,309,363
1003 363,365M,309
1004 363,365M,309
1005 363,365M,309
1006 363,365M,309
1007 363,365M,309
1008 365M,309,363
1009 363,365M,309
1010 363,365M,309
1011 363,365M,309
1020 360,346M,309
1021 360,346M,309