SELECT 
  cscart_products_categories.product_id, 
  GROUP_CONCAT(
    IF(
      cscart_products_categories.link_type = "M", 
      CONCAT(
        cscart_products_categories.category_id, 
        "M"
      ), 
      cscart_products_categories.category_id
    )
  ) AS category_ids 
FROM 
  cscart_products_categories 
  INNER JOIN cscart_categories ON cscart_categories.category_id = cscart_products_categories.category_id 
  AND cscart_categories.storefront_id IN (0, 1) 
  AND (
    cscart_categories.usergroup_ids = '' 
    OR FIND_IN_SET(
      0, cscart_categories.usergroup_ids
    ) 
    OR FIND_IN_SET(
      1, cscart_categories.usergroup_ids
    )
  ) 
  AND cscart_categories.status IN ('A', 'H') 
WHERE 
  cscart_products_categories.product_id IN (
    1020, 1021, 1016, 1017, 638, 639, 980, 
    981, 982, 983, 984, 985, 986, 987, 988, 
    990, 991, 992, 993, 994, 995, 996, 997, 
    998, 999, 1000, 1001, 1002, 1003, 1004, 
    1005, 1006, 1007, 1008, 1009, 1010, 
    1011
  ) 
GROUP BY 
  cscart_products_categories.product_id

Query time 0.00132

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "109.25"
    },
    "grouping_operation": {
      "using_temporary_table": true,
      "using_filesort": true,
      "cost_info": {
        "sort_cost": "5.16"
      },
      "nested_loop": [
        {
          "table": {
            "table_name": "cscart_categories",
            "access_type": "ALL",
            "possible_keys": [
              "PRIMARY",
              "c_status",
              "p_category_id"
            ],
            "rows_examined_per_scan": 125,
            "rows_produced_per_join": 5,
            "filtered": "4.00",
            "cost_info": {
              "read_cost": "29.49",
              "eval_cost": "1.00",
              "prefix_cost": "30.49",
              "data_read_per_join": "20K"
            },
            "used_columns": [
              "category_id",
              "storefront_id",
              "usergroup_ids",
              "status"
            ],
            "attached_condition": "((`cscart`.`cscart_categories`.`storefront_id` in (0,1)) and ((`cscart`.`cscart_categories`.`usergroup_ids` = '') or find_in_set(0,`cscart`.`cscart_categories`.`usergroup_ids`) or find_in_set(1,`cscart`.`cscart_categories`.`usergroup_ids`)) and (`cscart`.`cscart_categories`.`status` in ('A','H')))"
          }
        },
        {
          "table": {
            "table_name": "cscart_products_categories",
            "access_type": "ref",
            "possible_keys": [
              "PRIMARY",
              "pt"
            ],
            "key": "PRIMARY",
            "used_key_parts": [
              "category_id"
            ],
            "key_length": "3",
            "ref": [
              "cscart.cscart_categories.category_id"
            ],
            "rows_examined_per_scan": 12,
            "rows_produced_per_join": 5,
            "filtered": "8.60",
            "index_condition": "(`cscart`.`cscart_products_categories`.`product_id` in (1020,1021,1016,1017,638,639,980,981,982,983,984,985,986,987,988,990,991,992,993,994,995,996,997,998,999,1000,1001,1002,1003,1004,1005,1006,1007,1008,1009,1010,1011))",
            "cost_info": {
              "read_cost": "61.60",
              "eval_cost": "1.03",
              "prefix_cost": "104.09",
              "data_read_per_join": "82"
            },
            "used_columns": [
              "product_id",
              "category_id",
              "link_type"
            ]
          }
        }
      ]
    }
  }
}

Result

product_id category_ids
638 309M,365,363
639 309M,365,363
980 363,309,364M
981 364M,363,309
982 364M,363,309
983 309,364M,363
984 309,364M,363
985 309,364M,363
986 309,364M,363
987 363,309,364M
988 364M,363,309
990 309,364M,363
991 309,364M,363
992 309,363,365M
993 365M,309,363
994 363,365M,309
995 363,365M,309
996 363,365M,309
997 309,363,365M
998 309,363,365M
999 365M,309,363
1000 363,365M,309
1001 363,365M,309
1002 363,365M,309
1003 309,363,365M
1004 309,363,365M
1005 309,363,365M
1006 365M,309,363
1007 363,365M,309
1008 363,365M,309
1009 309,363,365M
1010 309,363,365M
1011 309,363,365M
1016 345,357M,309
1017 345,357M,309
1020 360,346M,309
1021 360,346M,309